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Added structured JSON logging with Pino.js

Mihail Radkov requested to merge feature/GDB-3401-add-logger into master
  • Populated server & repo clients with debug messages after successful execution
  • Added trace messages in http client to track request parameters and data
  • Added logging in the parser registry

Added HttpResponse class to act as a wrapper for the response from HttpClient and the elapsed time of the request.

Rearranged upload/add file methods for separate logging.

JIRA issue https://ontotext.atlassian.net/browse/GDB-3404

Additional changes:

  • Removed excess constructor parameter (forgotten after refactoring the http client)

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